F. Cattonaro : rechercher sur Z-Library

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1

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

Verde, Ignazio, Abbott, Albert G, Scalabrin, Simone, Jung, Sook, Shu, Shengqiang, Marroni, Fabio, Zhebentyayeva, Tatyana, Dettori, Maria Teresa, Grimwood, Jane, Cattonaro, Federica, Zuccolo, Andrea, R

Journal:

Nature Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2013

2

A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat

Rustenholz, C., Choulet, F., Laugier, C., Safar, J., Simkova, H., Dolezel, J., Magni, F., Scalabrin, S., Cattonaro, F., Vautrin, S., Bellec, A., Berges, H., Feuillet, C., Paux, E.

Journal:

PLANT PHYSIOLOGY

Année:

2011

Langue:

english

Fichier:

PDF, 1.83 MB

english, 2011

3

Analysis of transposons and repeat composition of the sunflower (Helianthus annuusL.) genome

Andrea Cavallini, Lucia Natali, Andrea Zuccolo, Tommaso Giordani, Irena Jurman, Veronica Ferrillo, Nicola Vitacolonna, Vania Sarri, Federica Cattonaro, Marilena Ceccarelli, Pier Giorgio Cionini, Miche

Journal:

Theoretical and Applied Genetics

Année:

2010

Langue:

english

Fichier:

PDF, 585 KB

english, 2010

4

An analysis of sequence variability in eight genes putatively involved in drought response in sunflower (Helianthus annuusL.)

T. Giordani, M. Buti, L. Natali, C. Pugliesi, F. Cattonaro, M. Morgante, A. Cavallini

Journal:

Theoretical and Applied Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 394 KB

english, 2011

5

HACRE1, a recently inserted copia -like retrotransposon of sunflower ( Helianthus annuus L.)

Bureau, Thomas, Buti, M., Giordani, T., Vukich, M., Gentzbittel, L., Pistelli, L., Cattonaro, F., Morgante, M., Cavallini, A., Natali, L.

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 307 KB

english, 2009

6

High-throughput physical map anchoring via BAC-pool sequencing

Cviková, Kateřina, Cattonaro, Federica, Alaux, Michael, Stein, Nils, Mayer, Klaus FX, Doležel, Jaroslav, Bartoš, Jan

Journal:

BMC Plant Biology

Année:

2015

Langue:

english

Fichier:

PDF, 992 KB

english, 2015

7

Construction of a minimum tiling path of BAC clones covering the Sharka resistance region in apricot

Savazzini, F., Ungarelli, M., Dondini, L., Tartarini, S., Falchi, R., De Mori, G., Messina, R., Testolin, R., Passaro, M., Geuna, F., Bassi, D., Cattonaro, F., Scalabrin, S.

Journal:

Acta Horticulturae

Année:

2017

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2017

8

Analysis of the genusZea(Poaceae) using polymorphic chloroplast simple sequence repeats

Jim Provan, Pat Lawrence, George Young, Frank Wright, Robert Bird, GianPaolo Paglia, Federica Cattonaro, Michele Morgante, Wayne Powell

Journal:

Plant Systematics and Evolution

Année:

1999

Langue:

english

Fichier:

PDF, 894 KB

english, 1999

9

Temporal dynamics in the evolution of the sunflower genome as revealed by sequencing and annotation of three large genomic regions

M. Buti, T. Giordani, F. Cattonaro, R. M. Cossu, L. Pistelli, M. Vukich, M. Morgante, A. Cavallini, L. Natali

Journal:

Theoretical and Applied Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 647 KB

english, 2011

10

Analysis of the distribution of marker classes in a genetic linkage map: a case study in Norway spruce (Picea abieskarst)

Ivan Scotti, Andrea Burelli, Federica Cattonaro, David Chagné, John Fuller, Peter E. Hedley, Gunnar Jansson, Celine Lalanne, Delphine Madur, David Neale, Christophe Plomion, Wayne Powell, Michela Trog

Journal:

Tree Genetics & Genomes

Année:

2005

Langue:

english

Fichier:

PDF, 305 KB

english, 2005

11

Nucleotide diversity and linkage disequilibrium inPopulus nigracinnamyl alcohol dehydrogenase (CAD4) gene

Fabio Marroni, Sara Pinosio, Giusi Zaina, Federico Fogolari, Nicoletta Felice, Federica Cattonaro, Michele Morgante

Journal:

Tree Genetics & Genomes

Année:

2011

Langue:

english

Fichier:

PDF, 542 KB

english, 2011

12

Large-scale detection of rare variants via pooled multiplexed next-generation sequencing: towards next-generation Ecotilling

Fabio Marroni, Sara Pinosio, Eleonora Di Centa, Irena Jurman, Wout Boerjan, Nicoletta Felice, Federica Cattonaro, Michele Morgante

Journal:

The Plant Journal

Année:

2011

Langue:

english

Fichier:

PDF, 275 KB

english, 2011

13

Functional features of a single chromosome arm in wheat (1AL) determined from its structure

Stuart J. Lucas, Hana Šimková, Jan Šafář, Irena Jurman, Federica Cattonaro, Sonia Vautrin, Arnaud Bellec, Hélène Berges, Jaroslav Doležel, Hikmet Budak

Journal:

Functional & Integrative Genomics

Année:

2012

Langue:

english

Fichier:

PDF, 304 KB

english, 2012

14

Application of genomics to grapevine improvement

G. DI GASPERO, F. CATTONARO

Journal:

Australian Journal of Grape and Wine Research

Année:

2010

Langue:

english

Fichier:

PDF, 436 KB

english, 2010

15

The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis

Domenico De Paola, Federica Cattonaro, Domenico Pignone, Gabriella Sonnante

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 572 KB

english, 2012

16

Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat

Bartoš, Jan, Vlček, Čestmír, Choulet, Frédéric, Džunková, Mária, Cviková, Kateřina, Šafář, Jan, Šimková, Hana, Pačes, Jan, Strnad, Hynek, Sourdille, Pierre, Bergès, Hélène, Cattonaro, Federica, Feuill

Journal:

BMC Plant Biology

Année:

2012

Langue:

english

Fichier:

PDF, 424 KB

english, 2012

17

First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species, Pinus halepensis Mill

Pinosio, S., González-Martínez, S. C., Bagnoli, F., Cattonaro, F., Grivet, D., Marroni, F., Lorenzo, Z., Pausas, J. G., Verdú, M., Vendramin, G. G.

Journal:

Molecular Ecology Resources

Année:

2014

Langue:

english

Fichier:

PDF, 188 KB

english, 2014

18

Flow Sorting and Sequencing Meadow Fescue Chromosome 4F

Kopecky, D., Martis, M., Cihalikova, J., Hribova, E., Vrana, J., Bartos, J., Kopecka, J., Cattonaro, F., Stoces, S., Novak, P., Neumann, P., Macas, J., Simkova, H., Studer, B., Asp, T., Baird, J. H.,

Journal:

PLANT PHYSIOLOGY

Année:

2013

Langue:

english

Fichier:

PDF, 1.97 MB

english, 2013

19

[IEEE 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Hong Kong, China (2010.12.18-2010.12.21)] 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Enhanced reference guided assembly

Cattonaro, Federica, Policriti, Alberto, Vezzi, Francesco

Année:

2010

Langue:

english

Fichier:

PDF, 415 KB

english, 2010

20

LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome

Barghini, E., Natali, L., Giordani, T., Cossu, R. M., Scalabrin, S., Cattonaro, F., imkova, H., Vrana, J., Dole el, J., Morgante, M., Cavallini, A.

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 576 KB

english, 2015

21

The Peculiar Landscape of Repetitive Sequences in the Olive (Olea europaea L.) Genome

Barghini, E., Natali, L., Cossu, R. M., Giordani, T., Pindo, M., Cattonaro, F., Scalabrin, S., Velasco, R., Morgante, M., Cavallini, A.

Journal:

Genome Biology and Evolution

Année:

2014

Langue:

english

Fichier:

PDF, 815 KB

english, 2014

22

Genomic Resources Notes Accepted 1 October 2014-30 November 2014

Baratti, Mariella, Cattonaro, Federica, Di Lorenzo, Tiziana, Galassi, Diana Maria Paola, Iannilli, Valentina, Iannucci, Alessio, Jensen, Just, Larsen, Peter Foged, Nielsen, Rasmus O., Pertoldi, Cino,

Journal:

Molecular Ecology Resources

Année:

2015

Langue:

english

Fichier:

PDF, 85 KB

english, 2015

23

Draft Genome Sequence of Lactobacillus rossiae DSM 15814T

Di Cagno, R., De Angelis, M., Cattonaro, F., Gobbetti, M.

Journal:

Journal of Bacteriology

Année:

2012

Langue:

english

Fichier:

PDF, 91 KB

english, 2012

24

Synergistic Parasite-Pathogen Interactions Mediated by Host Immunity Can Drive the Collapse of Honeybee Colonies

Nazzi, Francesco, Brown, Sam P., Annoscia, Desiderato, Del Piccolo, Fabio, Di Prisco, Gennaro, Varricchio, Paola, Della Vedova, Giorgio, Cattonaro, Federica, Caprio, Emilio, Pennacchio, Francesco, Sch

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 927 KB

english, 2012

25

Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays

Dell’Acqua, Matteo, Gatti, Daniel M., Pea, Giorgio, Cattonaro, Federica, Coppens, Frederik, Magris, Gabriele, Hlaing, Aye L., Aung, Htay H., Nelissen, Hilde, Baute, Joke, Frascaroli, Elisabetta, Churc

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 3.61 MB

english, 2015

26

A RAD-based linkage map of kiwifruit (Actinidia chinensisPl.) as a tool to improve the genome assembly and to scan the genomic region of the gender determinant for the marker-assisted breeding

Scaglione, Davide, Fornasiero, Alice, Pinto, Catalina, Cattonaro, Federica, Spadotto, Alessandro, Infante, Rodrigo, Meneses, Claudio, Messina, Rachele, Lain, Orietta, Cipriani, Guido, Testolin, Raffae

Journal:

Tree Genetics & Genomes

Année:

2015

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2015

27

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements

Akpinar, Bala Ani, Magni, Federica, Yuce, Meral, Lucas, Stuart J., Šimková, Hana, Šafář, Jan, Vautrin, Sonia, Bergès, Hélène, Cattonaro, Federica, Doležel, Jaroslav, Budak, Hikmet

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.73 MB

english, 2015

28

A knowledge base forVitis viniferafunctional analysis

Pulvirenti, Alfredo, Giugno, Rosalba, Distefano, Rosario, Pigola, Giuseppe, Mongiovi, Misael, Giudice, Girolamo, Vendramin, Vera, Lombardo, Alessandro, Cattonaro, Federica, Ferro, Alfredo

Journal:

BMC Systems Biology

Année:

2015

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2015

29

New resources for genetic studies in Populus nigra : genome-wide SNP discovery and development of a 12k Infinium array

Faivre-Rampant, P., Zaina, G., Jorge, V., Giacomello, S., Segura, V., Scalabrin, S., Guérin, V., De Paoli, E., Aluome, C., Viger, M., Cattonaro, F., Payne, A., PaulStephenRaj, P., Le Paslier, M. C., B

Journal:

Molecular Ecology Resources

Année:

2016

Langue:

english

Fichier:

PDF, 620 KB

english, 2016

30

Characterization of the Poplar Pan-Genome by Genome-Wide Identification of Structural Variation

Pinosio, Sara, Giacomello, Stefania, Faivre-Rampant, Patricia, Taylor, Gail, Jorge, Veronique, Le Paslier, Marie Christine, Zaina, Giusi, Bastien, Catherine, Cattonaro, Federica, Marroni, Fabio, Morga

Journal:

Molecular Biology and Evolution

Année:

2016

Langue:

english

Fichier:

PDF, 765 KB

english, 2016

31

The build-up of osmotic stress responses within the growing root apex using kinematics and RNA-sequencing

Royer, Mathilde, Cohen, David, Aubry, Nathalie, Vendramin, Vera, Scalabrin, Simone, Cattonaro, Federica, Bogeat-Triboulot, Marie-Béatrice, Hummel, Irène

Journal:

Journal of Experimental Botany

Année:

2016

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2016

32

HIGH-DENSITY MARKER GENOTYPING IN HAZELNUT (CORYLUS AVELLANA). I. GENOTYPING-BY-SEQUENCING APPROACH FOR EFFICIENT SNP DISCOVERY AND DNA TYPING

Scaglione, D., Fornasiero, A., Cattonaro, F., Pitoni, A., Torelli, D., Vittori, D., De Pace, C.

Journal:

Acta Horticulturae

Année:

2015

Langue:

english

Fichier:

PDF, 401 KB

english, 2015

33

Draft Genome Sequence of the Probiotic Yeast Kluyveromyces marxianus fragilis B0399

Quarella, Sara, Lovrovich, Paola, Scalabrin, Simone, Campedelli, Ilenia, Backovic, Ana, Gatto, Veronica, Cattonaro, Federica, Turello, Alessandro, Torriani, Sandra, Felis, Giovanna E.

Journal:

Genome Announcements

Année:

2016

Langue:

english

Fichier:

PDF, 148 KB

english, 2016

34

De novo assembly, functional annotation, and analysis of the giant reed (Arundo donaxL.) leaf transcriptome provide tools for the development of a biofuel feedstock

Evangelistella, Chiara, Valentini, Alessio, Ludovisi, Riccardo, Firrincieli, Andrea, Fabbrini, Francesco, Scalabrin, Simone, Cattonaro, Federica, Morgante, Michele, Mugnozza, Giuseppe Scarascia, Keure

Journal:

Biotechnology for Biofuels

Année:

2017

Langue:

english

Fichier:

PDF, 4.77 MB

english, 2017

35

Physical Map of the Short Arm of Bread Wheat Chromosome 3D

Holušová, Kateřina, Vrána, Jan, Šafář, Jan, Šimková, Hana, Balcárková, Barbora, Frenkel, Zeev, Darrier, Benoit, Paux, Etienne, Cattonaro, Federica, Berges, Helene, Letellier, Thomas, Alaux, Michael, D

Journal:

The Plant Genome

Année:

2017

Langue:

english

Fichier:

PDF, 1.35 MB

english, 2017

36

Genes and gene clusters related to genotype and drought-induced variation in saccharification potential, lignin content and wood anatomical traits in Populus nigra†

Wildhagen, Henning, Paul, Shanty, Allwright, Mike, Smith, Hazel K, Malinowska, Marta, Schnabel, Sabine K, Paulo, M João, Cattonaro, Federica, Vendramin, Vera, Scalabrin, Simone, Janz, Dennis, Douthe,

Journal:

Tree Physiology

Année:

2018

Langue:

english

Fichier:

PDF, 1.62 MB

english, 2018

37

Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A

Lucas, Stuart J., Akpınar, Bala Anı, Kantar, Melda, Weinstein, Zohar, Aydınoğlu, Fatma, Šafář, Jan, Šimková, Hana, Frenkel, Zeev, Korol, Abraham, Magni, Federica, Cattonaro, Federica, Vautrin, Sonia,

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 4.17 MB

english, 2013

38

A Physical Map of the Short Arm of Wheat Chromosome 1A

Breen, James, Wicker, Thomas, Shatalina, Margarita, Frenkel, Zeev, Bertin, Isabelle, Philippe, Romain, Spielmeyer, Wolfgang, Šimková, Hana, Šafář, Jan, Cattonaro, Federica, Scalabrin, Simone, Magni, F

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2013

39

A RAD-BASED LINKAGE MAP OF KIWIFRUIT (ACTINIDIA CHINENSIS PL.) AND MAP POSITION OF GENETIC DETERMINANTS OF TRAITS OF INTEREST TO BREEDERS

Scaglione, D., Fornasiero, A., Cattonaro, F., Mesa, K., Pinto, C., Shiny, P., Infante, R., Cooper, T., Meneses, C., Messina, R., Lain, O., Cipriani, G., Testolin, R.

Journal:

Acta Horticulturae

Année:

2015

Langue:

english

Fichier:

PDF, 427 KB

english, 2015

40

The microbiota of hematophagous ectoparasites collected from migratory birds

Cerutti, Francesco, Modesto, Paola, Rizzo, Francesca, Cravero, Alessandra, Jurman, Irena, Costa, Stefano, Giammarino, Mauro, Mandola, Maria Lucia, Goria, Mariella, Radovic, Slobodanka, Cattonaro, Fede

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 4.33 MB

english, 2018

41

Metagenomic profiles of different types of Italian high-moisture Mozzarella cheese

Marino, Marilena, Dubsky de Wittenau, Giorgia, Saccà, Elena, Cattonaro, Federica, Spadotto, Alessandro, Innocente, Nadia, Radovic, Slobodanka, Piasentier, Edi, Marroni, Fabio

Journal:

Food Microbiology

Année:

2019

Langue:

english

Fichier:

PDF, 1.89 MB

english, 2019

42

Alkaloid chemodiversity in Mandragora spp. is associated with loss-of-functionality of MoH6H, a hyoscyamine 6β-hydroxylase gene

Schlesinger, Daniel, Davidovich Rikanati, Rachel, Volis, Sergei, Faigenboim, Adi, Vendramin, Vera, Cattonaro, Federica, Hooper, Matthew, Oren, Elad, Taylor, Mark, Sitrit, Yaron, Inbar, Moshe, Lewinsoh

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2019

43

Single primer enrichment technology as a tool for massive genotyping: a benchmark on black poplar and maize

Scaglione, Davide, Pinosio, Sara, Marroni, Fabio, Centa, Eleonora Di, Fornasiero, Alice, Magris, Gabriele, Scalabrin, Simone, Cattonaro, Federica, Taylor, Gail, Morgante, Michele

Journal:

Annals of Botany

Année:

2019

Langue:

english

Fichier:

PDF, 1.13 MB

english, 2019

44

A multiscale approach to detect selection in non‐model tree species: widespread adaptation despite population decline in Taxus baccata L

Mayol, Maria, Riba, Miquel, Cavers, Stephen, Grivet, Delphine, Vincenot, Lucie, Cattonaro, Federica, Vendramin, Giovanni G., González‐Martínez, Santiago C.

Journal:

Evolutionary Applications

Année:

2019

Langue:

english

Fichier:

PDF, 1.49 MB

english, 2019

45

A multiscale approach to detect selection in non‐model tree species: widespread adaptation despite population decline in Taxus baccata L

Mayol, Maria, Riba, Miquel, Cavers, Stephen, Grivet, Delphine, Vincenot, Lucie, Cattonaro, Federica, Vendramin, Giovanni G., González‐Martínez, Santiago C.

Journal:

Evolutionary Applications

Année:

2019

Fichier:

PDF, 1.49 MB

2019

46

Detection of natural and induced mutations from next generation sequencing data in sweet orange bud sports

Caruso, M., Las Casas, G., Scaglione, D., Gattolin, S., Rossini, L., Distefano, G., Cattonaro, F., Catara, A., Licciardello, G., Morgante, M., Licciardello, C.

Journal:

Acta Horticulturae

Année:

2019

Fichier:

PDF, 692 KB

2019

47

Evolutionary relevance of lineages in the European black pine (Pinus nigra) in the transcriptomic era

Olsson, Sanna, Grivet, Delphine, Cattonaro, Federica, Vendramin, Vera, Giovannelli, Guia, Scotti-Saintagne, Caroline, Vendramin, Giovanni G., Fady, Bruno

Journal:

Tree Genetics & Genomes

Année:

2020

Fichier:

PDF, 666 KB

2020

48

A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm

Scalabrin, Simone, Toniutti, Lucile, Di Gaspero, Gabriele, Scaglione, Davide, Magris, Gabriele, Vidotto, Michele, Pinosio, Sara, Cattonaro, Federica, Magni, Federica, Jurman, Irena, Cerutti, Mario, Su

Journal:

Scientific Reports

Année:

2020

Langue:

english

Fichier:

PDF, 3.65 MB

english, 2020